IMR_AtlanticSalmonMortality2020

Estimated salmon lice induced mortality of Atlantic salmon

Dataset Creator	Dataset Title	Dataset Release Date	Dataset Publisher	Dataset DOI	Online Resource
Ingrid A. Johnsen, Anne D. Sandvik, Jon Albretsen	Estimated salmon lice induced mortality of Atlantic salmon	2021-12-01T00:00:00:00Z	Institute of Marine Research	10.21335/NMDC-1336748445	http://metadata.nmdc.no/metadata-api/landingpage/a23be3156e255e6d5650dc2393a7b791

Role	First Name	Last Name	Email	Middle Name
DIF Author	Arnfinn	Morvik
Technical Contact	Jon	Albretsen	jon.albretsen@imr.no
Investigator	Ingrid	Johnsen		Askeland
Technical Contact	Anne Dagrunn	Sandvik

Category	Topic	Term	Variable Level 1	Variable Level 2	Variable Level 3
EARTH SCIENCE	BIOLOGICAL CLASSIFICATION	ANIMALS/INVERTEBRATES	ARTHROPODS	CRUSTACEANS	COPEPODS
EARTH SCIENCE	BIOLOGICAL CLASSIFICATION	ANIMALS/VERTEBRATES	FISH	RAY-FINNED FISHES	SALMONS/TROUTS
EARTH SCIENCE	OCEANS	AQUATIC SCIENCES	AQUACULTURE

Oceans

Atlantic salmon,salmon lice,mortality,sustainability,management,aquaculture

Start Date	Stop Date
2012-01-01	2020-12-31

Complete

Location Category	Location Type	Location Subregion1	Location Subregion2
Ocean	Atlantic Ocean	North Atlantic Ocean	Norwegian Sea

unrestricted

Institute of Marine Research

Data Center Name	Data Center URL	Personnel
NO/IMR Institute of Marine Research	http://www.imr.no	Originating institution Jon Albretsen jon.albretsen@imr.no

Distribution Media	Distribution Format
FTP	Excel files

Johnsen IA, Harvey A, Sævik PN, Sandvik AD, Ugedal O, Ådlandsvik B, Wennevik V, Glover KA, and Karlsen Ø (2020) Salmon lice induced mortality of Atlantic salmon during post-smolt migration in Norway ICES Journal of Marine Science (in press) Harvey AC, Quintela M, Glover KA, Karlsen Ø, Nilsen R, Skaala Ø, Sægrov H, Kålås S, Knutar S, and Wennevik V (2019) Inferring Atlantic salmon post-smolt migration patterns using genetic assignment. Royal Society open science, 6(10), 190426 Sandvik AD, Ådlandsvik B, Asplin L, Johnsen IA, Myksvoll M, and Albretsen J (2020) Salmon lice LADIM V2 https://doi.org/10.21335/NMDC-410516615 Taranger GL, Karlsen O, Bannister RJ, Glover KA, Husa V, Karlsbakk E, Kvamme BO, Boxaspen KK, Bjorn PA, Finstad B, Madhun AS, Morton HC and Svasand T (2015) Risk assessment of the environmental impact of Norwegian Atlantic salmon farming. Ices Journal of Marine Science 72, 997-1021.

Estimated salmon lice (Lepeophtheirus salmonis) induced mortality of Atlantic salmon (Salmo salar) during post-smolt migration in Norway. The dataset contains river specific annual estimated mortality from 2012. The mortality is estimated using a model approach described in detail in Johnsen et al. (2020). In short, the salmon post-smolts migration from river to the open ocean is simulated and coupled to the salmon lice concentration field provided by Sandvik et al. (2020). Based upon observed level of salmon lice infestation on trawled wild post-smolts the model is calibrated to fit the observed levels. The wild fish, captured by trawl, is genetically assigned to their homing river as described in Harvey et al. (2019). Further, by assuming tolerance to salmon lice in accordance to Taranger et al. (2015) the mortality was estimated from the modelled infestation levels. The mortality was also estimated for fish with assumed migration 10 days earlier and later, and for fish with assumed higher and lower tolerance to lice infestation levels.

URL Content Type	URL
LATEST VERSION	https://doi.org/10.21335/NMDC-2092467894

Norwegian Marine Datacentre

CEOS IDN DIF

9.7.1

2020-09-21T00:00:00:00Z

CC BY 4.0

POLYGON((31.4 57.4,3.6 57.4,3.6 71.6,31.4 71.6,31.4 57.4))